Artist - Untitled

Animated "shadow-box" of a patch clamp current clamp recording from the neocortex.

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Contributing Writer - The Dorsal Column

Neuroscience blog posts about research ongoing at UWO, written for the general public!

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pyCEDFS

Python interface to extract and convert data from CFS (neuroscience data) format. Includes conversion to Neuroscience without borders (NWB) format.

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Backend developer - Primate Cell Type Database

Contributing backend developer for The JMT Primate Cell Type Database. Built the data dashboard for the intracellular ephys table.

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pyAPisolation

Python script to extract action potentials and action potential features ABF files. Facilitates data dashboarding and data visualization of neural time-series data.

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Creating relief maps with real in vitro neurons

Extracting relief data from images in python, then building stimulus waveforms from the images. Playing the stimulus to real live neurons and seeing how they react.

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ScienceGAN 

NVIDA's stylegan trained on 10k images scraped from pubmed. Generates de novo scientific journal article figures.  

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sNMO (single neuron model optimizer)   

Optimization library for fitting single neuron models (adex, LIF, cadex, and more!) to in vitro / ex vivo neuron recordsings from patch clamp ephys. Features several customized optimization techniques including genetic algorithms, bayesian optimization, and neural network based posterior modelling.  

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AdEx Neural ODE 

Modelling of single neuron dynamics using the adaptive exponential integrate and fire neuron. Built on a pytorch backend using Neural ODE

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